USH2A-AS1

Across TCGA patient cohorts, USH2A-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,798 significant associations in total. STAD shows the largest number of these associations.

The most reproducible USH2A-AS1-associated GO terms across cancer lineages are Establishment of protein localization to membrane, Endosomal transport, and Regulation of generation of precursor metabolites and energy. Each is linked with USH2A-AS1 in more than 5 cancer types. Because this analysis shows association rather than direction, both USH2A-AS1-to-partner and partner-to-USH2A-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to membrane grouped by USH2A-AS1-low versus USH2A-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (USH2A-AS1→partner) and Y-score (partner→USH2A-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Establishment of protein localization to membrane →	+0.157	+0.061	<.001	.003	2	6
STAD	Endosomal transport →	+0.142	+0.059	<.001	.003	2	6
ESCA	Regulation of generation of precursor metabolites and energy →	+0.133	+0.021	<.001	.003	2	6
STAD	Rac protein signal transduction →	+0.115	+0.044	<.001	.002	3	5
STAD	Organic hydroxy compound biosynthetic process →	+0.096	+0.037	<.001	<.001	3	5
STAD	Polysaccharide biosynthetic process →	+0.115	+0.063	<.001	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,798 associations by consensus.

Establishment of protein localization to membrane by USH2A-AS1 expression — STAD

Explore this box plot interactively →