UBXN4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBXN4 mutation is significantly associated with the RNA expression of many other genes, with 1,774 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible UBXN4-associated genes across cancer lineages are CRLF3P2, ATP5F1B, and RNA5SP210. Each is linked with UBXN4 in more than 2 cancer types. Because this analysis shows association rather than direction, both UBXN4-to-partner and partner-to-UBXN4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CRLF3P2 grouped by UBXN4-low versus UBXN4-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBXN4→partner) and Y-score (partner→UBXN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCRLF3P2 →+0.038+5.044.008.00933
UCECATP5F1B →+0.566+3.708.004<.00133
LUSCRNA5SP210 →+0.250+2.677.002.00333
HNSCE2F6P1 →+0.046+5.178<.001.00233
UCECRN7SL650P →+0.284+2.233.002.00132
UCECRNA5SP412 →+0.654+2.315<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,774 associations by consensus.

CRLF3P2 by UBXN4 expression — LUAD

Box plot of CRLF3P2 in UBXN4-low vs UBXN4-high samples in LUAD.

Explore this box plot interactively →

Exploration