UBE4B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBE4B mutation is significantly associated with the RNA expression of many other genes, with 5,021 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible UBE4B-associated genes across cancer lineages are CFTR, NDUFB6, and TYMSOS. Each is linked with UBE4B in more than 3 cancer types. Because this analysis shows association rather than direction, both UBE4B-to-partner and partner-to-UBE4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CFTR grouped by UBE4B-low versus UBE4B-high in STAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBE4B→partner) and Y-score (partner→UBE4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADCFTR →-2.050-3.459<.001.00534
UCECNDUFB6 →+0.475+2.180<.001.00134
UCECTYMSOS →+0.776+1.890<.001<.00134
UCECRFC5 →+0.469+1.475<.001.00334
UCECATP5IF1 →+0.402+1.879<.001<.00134
UCECC12orf65 →+0.350+1.723<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,021 associations by consensus.

CFTR by UBE4B expression — STAD

Box plot of CFTR in UBE4B-low vs UBE4B-high samples in STAD.

Explore this box plot interactively →

Exploration