UBE2N

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBE2N protein abundance is significantly associated with the RNA expression of many other genes, with 10,854 significant associations in total. GBM shows the largest number of these associations.

The most reproducible UBE2N-associated genes across cancer lineages are LTA4H, DPYD, and C12orf73. Each is linked with UBE2N in more than 3 cancer types. Because this analysis shows association rather than direction, both UBE2N-to-partner and partner-to-UBE2N results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, UBE2N versus LTA4H in BRCA, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBE2N→partner) and Y-score (partner→UBE2N) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCALTA4H →+0.499+0.332<.001<.00134
GBMDPYD →-1.201-0.201<.001<.00134
OVC12orf73 →+0.484+0.281<.001.00134
PDACCALU →-0.530-0.258<.001<.00134
UCECOVGP1 →+2.669+0.150.001.00234
GBMABCC3 →-1.515-0.166<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,854 associations by consensus.

UBE2N vs LTA4H — BRCA

Per-sample scatter of UBE2N vs LTA4H in BRCA (Pearson r = 0.37).

Explore this scatter interactively →

Exploration