UBE2N

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, UBE2N RNA differs between tumor and matched normal tissue in 15 of 18 cancer types tested, making tumor–normal expression one of UBE2N’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where UBE2N RNA is more highly expressed in tumor relative to normal tissue. In most cancer types UBE2N is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

BLCA, LIHC, and HNSC are the cancer types where UBE2N tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in UBE2N RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAAllAll+0.432<.00110view →
LIHCMaleIII,IV+1.018<.0019view →
HNSCMaleAll+0.445<.0018view →
THCAAllII,III,IV−0.393<.0018view →
KICHFemaleAll−0.889<.0017view →
BRCAAllIII,IV+0.639<.0016view →
LUSCFemaleAll+0.584<.0016view →
STADAllII,III,IV+0.570<.0016view →
COADAllII,III,IV+0.500<.0016view →
CHOLMaleAll+1.890<.0015view →
ESCAAllAll+0.858.0034view →
UCECAllIII,IV+0.577.0304view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 15 lineages.

UBE2N–BLCA

Tumor-vs-normal expression box plot for UBE2N RNA in BLCA.

Open the BLCA breakdown →

Exploration