UBE2D3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, UBE2D3 protein abundance is significantly associated with the RNA expression of many other genes, with 1,831 significant associations in total. GBM shows the largest number of these associations.

The most reproducible UBE2D3-associated genes across cancer lineages are NKX2-3, NUP93, and SPAG1. Each is linked with UBE2D3 in more than 1 cancer types. Because this analysis shows association rather than direction, both UBE2D3-to-partner and partner-to-UBE2D3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, UBE2D3 versus NKX2-3 in COAD, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBE2D3→partner) and Y-score (partner→UBE2D3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADNKX2-3 →-0.526-0.579.003.00132
COADNUP93 →+0.638+0.713.001.00131
COADSPAG1 →-0.679-0.719.004.00131
COADLHB →+0.315+0.703.004.00331
COADSNX4 →-0.358-0.624.006.00431
COADATP6V1B1 →+0.053+0.878.005<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,831 associations by consensus.

UBE2D3 vs NKX2-3 — COAD

Per-sample scatter of UBE2D3 vs NKX2-3 in COAD (Pearson r = -0.38).

Explore this scatter interactively →

Exploration