UBE2D3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, UBE2D3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,269 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible UBE2D3-associated GO terms across cancer lineages are Box C/D sno(s)RNA metabolic process, Box C/D sno(s)RNA processing, and Box C/D sno(s)RNA 3'-end processing. Each is linked with UBE2D3 in more than 12 cancer types. Because this analysis shows association rather than direction, both UBE2D3-to-partner and partner-to-UBE2D3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Box C/D sno(s)RNA metabolic process grouped by UBE2D3-low versus UBE2D3-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (UBE2D3→partner) and Y-score (partner→UBE2D3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCBox C/D sno(s)RNA metabolic process →+0.157+0.510.002.004213
LUNG_SCLCBox C/D sno(s)RNA processing →+0.157+0.510.002.004213
LUNG_SCLCBox C/D sno(s)RNA 3'-end processing →+0.157+0.510.002.004213
BLOOD_LymphomaRegulation of chromosome condensation →+0.138+0.622.001.008311
LARGE_INTESTINEDNA alkylation repair →+0.077+0.426<.001<.001311
PANCREASCAAX-box protein maturation →+0.116+0.575.001.002311
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,269 associations by consensus.

Box C/D sno(s)RNA metabolic process by UBE2D3 expression — LUNG_SCLC

Box plot of Box C/D sno(s)RNA metabolic process in UBE2D3-low vs UBE2D3-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration