TYK2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TYK2 mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TYK2-associated genes across cancer lineages are MEK1, eEF2, and eIF4E. Each is linked with TYK2 in more than 3 cancer types. Because this analysis shows association rather than direction, both TYK2-to-partner and partner-to-TYK2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by TYK2-low versus TYK2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TYK2→partner) and Y-score (partner→TYK2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.261+1.678.020.01934
UCECeEF2 →+0.276+1.906.011.01433
UCECeIF4E →+0.179+1.925.005.00433
UCECEGFR_pY1068 →-0.251-2.502.001.00132
UCECA-Raf_pS299 →-0.094-1.064.010.04832
UCECFOXO3a_pS318_S321 →-0.086-1.916.023.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

MEK1 by TYK2 expression — UCEC

Box plot of MEK1 in TYK2-low vs TYK2-high samples in UCEC.

Explore this box plot interactively →

Exploration