TXNL1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TXNL1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,705 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TXNL1-associated genes across cancer lineages are DYM, SMAD4, and MBD2. Each is linked with TXNL1 in more than 6 cancer types. Because this analysis shows association rather than direction, both TXNL1-to-partner and partner-to-TXNL1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TXNL1 versus DYM in LSCC, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TXNL1→partner) and Y-score (partner→TXNL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDYM →+0.617+0.407<.001<.00137
LSCCSMAD4 →+0.649+0.404<.001<.00137
LSCCMBD2 →+0.597+0.374<.001<.00137
LSCCELAC1 →+0.522+0.342<.001<.00136
LSCCNEDD4L →+0.944+0.374<.001<.00136
HNSCVPS4B →+0.611+0.193<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,705 associations by consensus.

TXNL1 vs DYM — LSCC

Per-sample scatter of TXNL1 vs DYM in LSCC (Pearson r = 0.69).

Explore this scatter interactively →

Exploration