TTC39A

Across TCGA patient cohorts, TTC39A protein abundance is significantly associated with the RNA expression of many other genes, with 17,160 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TTC39A-associated genes across cancer lineages are TTC39A-AS1, ARFGEF3, and HGD. Each is linked with TTC39A in more than 7 cancer types. Because this analysis shows association rather than direction, both TTC39A-to-partner and partner-to-TTC39A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TTC39A versus TTC39A-AS1 in BRCA, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TTC39A→partner) and Y-score (partner→TTC39A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	TTC39A-AS1 →	+1.092	+0.845	<.001	<.001	3	8
BRCA	ARFGEF3 →	+1.870	+1.163	<.001	<.001	3	6
BRCA	HGD →	+1.912	+0.883	<.001	<.001	3	6
BRCA	MLPH →	+2.636	+0.859	<.001	<.001	3	6
BRCA	SCP2 →	+0.579	+0.584	.002	.004	3	6
UCEC	ACADS →	+1.230	+0.605	.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,160 associations by consensus.

TTC39A vs TTC39A-AS1 — BRCA

Explore this scatter interactively →