TSSK4

Across TCGA patient cohorts, TSSK4 protein abundance is significantly associated with the RNA expression of many other genes, with 1,878 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TSSK4-associated genes across cancer lineages are CSMD2, SLC39A8, and SNORD65C. Each is linked with TSSK4 in more than 1 cancer types. Because this analysis shows association rather than direction, both TSSK4-to-partner and partner-to-TSSK4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TSSK4 versus CSMD2 in LUAD, with a Pearson correlation of 0.66.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TSSK4→partner) and Y-score (partner→TSSK4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	CSMD2 →	+0.956	+3.191	<.001	.001	3	2
GBM	SLC39A8 →	-1.687	-1.252	.001	.003	3	2
LUAD	SNORD65C →	+2.378	+2.375	.001	.005	3	2
GBM	CSMD2-AS1 →	+0.863	+1.091	<.001	<.001	3	2
GBM	FTL →	-1.212	-1.234	.008	.009	3	2
GBM	SHISAL2B →	+1.006	+1.581	.003	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,878 associations by consensus.

TSSK4 vs CSMD2 — LUAD

Explore this scatter interactively →