TSPAN6

total protein — cross-omics
Cross-omicsPROTEIN-RPPA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TSPAN6 total protein is significantly associated with the go_rna of many other GO terms, with 4,717 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible TSPAN6-associated GO terms across cancer lineages are Heme biosynthetic process, Heme metabolic process, and Porphyrin-containing compound metabolic process. Each is linked with TSPAN6 in more than 8 cancer types. Because this analysis shows association rather than direction, both TSPAN6-to-partner and partner-to-TSPAN6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Heme biosynthetic process grouped by TSPAN6-low versus TSPAN6-high in OVARY.

total protein associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TSPAN6→partner) and Y-score (partner→TSPAN6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYHeme biosynthetic process →-0.090-0.516.002.00939
LUNG_NSCLC_LUADHeme metabolic process →-0.073-0.263.001.03939
OVARYPorphyrin-containing compound metabolic process →-0.074-0.460.009.00738
STOMACHPorphyrin-containing compound biosynthetic process →-0.093-0.506.017.03638
URINARY_TRACTAdult walking behavior →-1.042-0.433.030.01538
LUNG_SCLCTetrapyrrole metabolic process →-0.076-0.521.006.00538
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,717 associations by consensus.

Heme biosynthetic process by TSPAN6 expression — OVARY

Box plot of Heme biosynthetic process in TSPAN6-low vs TSPAN6-high samples in OVARY.

Explore this box plot interactively →

Exploration