TSPAN1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TSPAN1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,956 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible TSPAN1-associated GO terms across cancer lineages are Positive regulation of iron ion transport, Positive regulation of iron ion transmembrane transport, and Regulation of action potential. Each is linked with TSPAN1 in more than 13 cancer types. Because this analysis shows association rather than direction, both TSPAN1-to-partner and partner-to-TSPAN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of iron ion transport grouped by TSPAN1-low versus TSPAN1-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TSPAN1→partner) and Y-score (partner→TSPAN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSPositive regulation of iron ion transport →+1.838+3.563<.001.003314
OESOPHAGUSPositive regulation of iron ion transmembrane transport →+1.838+3.563<.001.003314
STOMACHRegulation of action potential →+0.135+3.130<.001<.001314
OESOPHAGUSResponse to steroid hormone →+0.099+4.206.004<.001313
OESOPHAGUSNegative regulation of actin filament polymerization →+0.194+4.217<.001<.001313
LUNG_SCLCRegulation of potassium ion import →+0.244+2.899<.001.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,956 associations by consensus.

Positive regulation of iron ion transport by TSPAN1 expression — OESOPHAGUS

Box plot of Positive regulation of iron ion transport in TSPAN1-low vs TSPAN1-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration