TSHB

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TSHB RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of TSHB’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where TSHB RNA is repressed in tumor relative to normal tissue. In most cancer types TSHB is over-expressed in tumor, although a few such as BLCA and THCA show the opposite, repressed pattern.

BLCA, THCA, and KIRP are the cancer types where TSHB tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TSHB RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAMaleIII,IV−1.104<.00111view →
THCAAllII,III,IV−0.154<.00110view →
KIRPMaleAll−0.290<.0019view →
COADAllII,III,IV−0.236<.0018view →
KIRCAllAll−0.186<.0018view →
KICHAllAll−0.305<.0017view →
UCECAllAll−0.906<.0016view →
LUSCMaleII,III,IV−0.376<.0016view →
BRCAAllAll−0.255<.0016view →
READFemaleAll−0.632.0024view →
LUADAllAll−0.162.0022view →
STADMaleAll−0.230.0461view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

TSHB–BLCA

Tumor-vs-normal expression box plot for TSHB RNA in BLCA.

Open the BLCA breakdown →

Exploration