TSC22D1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TSC22D1-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of TSC22D1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where TSC22D1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types TSC22D1-AS1 is over-expressed in tumor, although a few such as KIRC and KICH show the opposite, repressed pattern.

KIRC, KICH, and COAD are the cancer types where TSC22D1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TSC22D1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll−0.364<.00110view →
KICHAllAll−0.559<.0018view →
COADMaleII,III,IV+0.510<.0016view →
LIHCAllAll+0.068<.0015view →
PAADAllAll+0.484.0264view →
ESCAAllII,III,IV+0.630.0202view →
CHOLAllAll+0.401<.0012view →
PRADAllAll+0.294.0022view →
ESCAFemaleAll−0.366.0111view →
KIRPMaleAll−0.251.0391view →
THCAFemaleIII,IV+0.224.0481view →
LUADAllAll+0.183.0201view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 11 lineages.

TSC22D1-AS1–KIRC

Tumor-vs-normal expression box plot for TSC22D1-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration