TRPC5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRPC5 mutation is significantly associated with the RNA expression of many other genes, with 8,564 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRPC5-associated genes across cancer lineages are GSKIP, OIP5, and DLGAP5. Each is linked with TRPC5 in more than 4 cancer types. Because this analysis shows association rather than direction, both TRPC5-to-partner and partner-to-TRPC5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GSKIP grouped by TRPC5-low versus TRPC5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRPC5→partner) and Y-score (partner→TRPC5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGSKIP →+0.496+1.887<.001<.00135
UCECOIP5 →+0.884+2.536<.001<.00135
UCECDLGAP5 →+0.753+1.721<.001<.00135
UCECNUSAP1 →+0.820+2.514<.001<.00135
UCECPDSS1 →+0.374+1.684<.001.00235
UCECDLAT →+0.627+2.078<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,564 associations by consensus.

GSKIP by TRPC5 expression — UCEC

Box plot of GSKIP in TRPC5-low vs TRPC5-high samples in UCEC.

Explore this box plot interactively →

Exploration