TRMT9B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRMT9B protein abundance is significantly associated with the RNA expression of many other genes, with 184 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TRMT9B-associated genes across cancer lineages are CBX7, SNTA1, and CD99L2. Each is linked with TRMT9B in more than 1 cancer types. Because this analysis shows association rather than direction, both TRMT9B-to-partner and partner-to-TRMT9B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRMT9B versus CBX7 in GBM, with a Pearson correlation of -0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRMT9B→partner) and Y-score (partner→TRMT9B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCBX7 →-0.804-0.484.001.00331
GBMSNTA1 →-1.030-0.409.001.00931
GBMCD99L2 →-0.828-0.570.001.00131
GBMPOLR2C →-0.251-0.506.002.00331
GBMKIR3DX1 →-0.199-0.491.002.00231
GBMFBXW4 →-0.466-0.378.003.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 184 associations by consensus.

TRMT9B vs CBX7 — GBM

Per-sample scatter of TRMT9B vs CBX7 in GBM (Pearson r = -0.55).

Explore this scatter interactively →

Exploration