Across TCGA patient cohorts, TRMT12 protein abundance is significantly associated with the RNA expression of many other genes, with 678 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TRMT12-associated genes across cancer lineages are PHF12, ANXA9, and HMGA1P2. Each is linked with TRMT12 in more than 1 cancer types. Because this analysis shows association rather than direction, both TRMT12-to-partner and partner-to-TRMT12 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRMT12→partner) and Y-score (partner→TRMT12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PHF12 →	-0.707	-0.575	.003	.001	3	2
HNSC	ANXA9 →	-1.774	-0.718	.002	.006	3	2
OV	HMGA1P2 →	+1.714	+0.417	.007	.005	3	2
BRCA	SLC52A3 →	-0.902	-0.514	.006	.008	3	1
BRCA	AQP9 →	+1.105	+0.485	.009	.007	3	1
BRCA	IL4I1 →	+1.094	+0.488	.006	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 678 associations by consensus.

Exploration

TRMT12 survival (RNA) · tumor vs normal (RNA) · all TRMT12 data types