TRIM56

Across TCGA patient cohorts, TRIM56 protein abundance is significantly associated with the RNA expression of many other genes, with 8,813 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TRIM56-associated genes across cancer lineages are ARMC10, PSMC2, and FAM185A. Each is linked with TRIM56 in more than 4 cancer types. Because this analysis shows association rather than direction, both TRIM56-to-partner and partner-to-TRIM56 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRIM56 versus ARMC10 in LSCC, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM56→partner) and Y-score (partner→TRIM56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ARMC10 →	+0.553	+0.128	<.001	<.001	3	5
HNSC	PSMC2 →	+0.570	+0.154	<.001	<.001	3	4
HNSC	FAM185A →	+0.871	+0.159	<.001	.002	3	4
HNSC	GTPBP10 →	+0.691	+0.155	<.001	<.001	3	4
HNSC	DNAJC2 →	+0.607	+0.121	<.001	<.001	3	4
BRCA	SEM1 →	+0.657	+0.153	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,813 associations by consensus.

TRIM56 vs ARMC10 — LSCC

Explore this scatter interactively →