TRIM29

Across TCGA cell cohorts, TRIM29 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,880 significant associations in total. URINARY_TRACT shows the largest number of these associations.

The most reproducible TRIM29-associated GO terms across cancer lineages are Positive regulation of iron ion transport, Positive regulation of iron ion transmembrane transport, and Negative regulation of hippocampal neuron apoptotic process. Each is linked with TRIM29 in more than 13 cancer types. Because this analysis shows association rather than direction, both TRIM29-to-partner and partner-to-TRIM29 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of iron ion transport grouped by TRIM29-low versus TRIM29-high in URINARY_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM29→partner) and Y-score (partner→TRIM29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
URINARY_TRACT	Positive regulation of iron ion transport →	+2.019	+5.182	<.001	<.001	3	14
URINARY_TRACT	Positive regulation of iron ion transmembrane transport →	+2.019	+5.182	<.001	<.001	3	14
OVARY	Negative regulation of hippocampal neuron apoptotic process →	+1.356	+2.530	<.001	<.001	3	12
URINARY_TRACT	Nuclear matrix anchoring at nuclear membrane →	+0.211	+4.542	<.001	<.001	3	11
URINARY_TRACT	Nuclear matrix organization →	+0.211	+4.542	<.001	<.001	3	11
LUNG_NSCLC_LUSC	NMDA selective glutamate receptor signaling pathway →	+0.276	+4.411	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,880 associations by consensus.

Positive regulation of iron ion transport by TRIM29 expression — URINARY_TRACT

Explore this box plot interactively →