TRIM2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TRIM2 protein abundance is significantly associated with the RNA expression of many other genes, with 18,514 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible TRIM2-associated genes across cancer lineages are SH3RF1, KLHL23, and ANXA2P1. Each is linked with TRIM2 in more than 6 cancer types. Because this analysis shows association rather than direction, both TRIM2-to-partner and partner-to-TRIM2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRIM2 versus SH3RF1 in OV, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRIM2→partner) and Y-score (partner→TRIM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSH3RF1 →+0.794+0.388.003.00137
HNSCKLHL23 →+1.046+0.645<.001<.00137
LUADANXA2P1 →+1.118+0.739<.001<.00137
OVPPFIBP2 →+0.772+0.441<.001<.00136
UCECNWD1 →+0.986+0.439<.001<.00136
OVOPHN1 →+0.803+0.458<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,514 associations by consensus.

TRIM2 vs SH3RF1 — OV

Per-sample scatter of TRIM2 vs SH3RF1 in OV (Pearson r = 0.46).

Explore this scatter interactively →

Exploration