TRDN-AS1

Across TCGA patient cohorts, TRDN-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,599 significant associations in total. STAD shows the largest number of these associations.

The most reproducible TRDN-AS1-associated GO terms across cancer lineages are Ribose phosphate biosynthetic process, Negative regulation of protein ubiquitination, and Regulation of neuron differentiation. Each is linked with TRDN-AS1 in more than 10 cancer types. Because this analysis shows association rather than direction, both TRDN-AS1-to-partner and partner-to-TRDN-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribose phosphate biosynthetic process grouped by TRDN-AS1-low versus TRDN-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TRDN-AS1→partner) and Y-score (partner→TRDN-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Ribose phosphate biosynthetic process →	+0.075	+0.089	<.001	<.001	3	11
STAD	Negative regulation of protein ubiquitination →	+0.074	+0.095	<.001	<.001	3	11
STAD	Regulation of neuron differentiation →	+0.042	+0.080	<.001	<.001	3	11
STAD	Cellular respiration →	+0.083	+0.098	<.001	<.001	3	11
STAD	Negative regulation of mRNA processing →	+0.077	+0.088	<.001	<.001	3	10
ESCA	Protein stabilization →	+0.083	+0.168	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,599 associations by consensus.

Ribose phosphate biosynthetic process by TRDN-AS1 expression — STAD

Explore this box plot interactively →