TRBV6-4

associated omics data
T cell receptor beta variable 6-4Genealiases: TCRBV13S5 · TCRBV6S4 · TRBV64

Q-omics provides the consensus-scored TRBV6-4 profile across patient tissues and cancer cell-line models. TRBV6-4 expression is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, TRBV6-4 is differentially expressed in 5, with the highest sampling consensus in KIRC. Additionally, TRBV6-4 RNA expression shows 11,348 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight BRCA, KIRC, and THYM as cancer lineages where TRBV6-4 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes TRBV6-4 survival associations across molecular data types. TRBV6-4 RNA expression shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
TRBV6-4 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier24BRCA (93)view →
This table ranks reproducible TRBV6-4 RNA expression–survival associations across cancer types. High TRBV6-4 expression shows unfavorable associations in UVM, but favorable associations in BRCA, HNSC, SKCM, ESCA and THCA. The BRCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .001). Together, the overview and detailed table identify BRCA as the clearest survival context for TRBV6-4 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCAOSQuartileII,III,IV0.6740.523.00193view →
HNSCOSTertileAll0.4510.320.00180view →
UVMDFSTertileAll0.4610.809.00275view →
SKCMOSMedianAll0.5350.274<.00152view →
ESCADFSTertileAll0.6240.415.00549view →
THCAOSMedianII,III,IV1.0000.657.00746view →
Pink = unfavorable, green = favorable. all 24 lineages →

TRBV6-4-BRCA (OS)

Kaplan–Meier survival curve for TRBV6-4 RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes TRBV6-4 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 5. The strongest signals are observed in KIRC for RNA.
TRBV6-4 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot5KIRC (7)view →
This table ranks reproducible tumor–normal expression differences for TRBV6-4. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. TRBV6-4 shows lower tumor expression in LUSC, KICH and HNSC and higher tumor expression in KIRC and ESCA. The KIRC box plot shows higher TRBV6-4 RNA expression in tumor versus normal tissue (log2 FC = +0.284, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCAllAll+0.284<.0017view →
LUSCAllAll−0.192<.0014view →
ESCAAllII,III,IV+0.290.0182view →
KICHFemaleAll−0.215.0122view →
HNSCMaleIV−0.132.0352view →
Green = repressed in tumor. all 5 lineages →

TRBV6-4-KIRC

Tumor-vs-normal expression box plot for TRBV6-4 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with TRBV6-4 in patient tissues and cancer cell lines. In patient samples, TRBV6-4 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA11,348THYM (3696)view →
Protein (mass-spec)10,840PDAC (5330)view →