TRBV5-4

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TRBV5-4 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of TRBV5-4’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where TRBV5-4 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types TRBV5-4 is over-expressed in tumor, although a few such as PAAD and LUSC show the opposite, repressed pattern.

KIRC, BRCA, and PAAD are the cancer types where TRBV5-4 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TRBV5-4 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleIV+1.030<.00110view →
BRCAAllAll+0.263.0134view →
PAADAllAll−1.417.0372view →
STADFemaleAll+1.134.0122view →
LUSCMaleIII,IV−1.069.0291view →
CHOLAllAll+0.824.0371view →
KICHFemaleAll−0.350.0151view →
COADFemaleAll−0.296.0391view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

TRBV5-4–KIRC

Tumor-vs-normal expression box plot for TRBV5-4 RNA in KIRC.

Open the KIRC breakdown →

Exploration