Across TCGA patient cohorts, TRAV20 mutation is significantly associated with the RNA expression of many other genes, with 63 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TRAV20-associated genes across cancer lineages are RNU2-58P, RN7SL840P, and MIR6864. Each is linked with TRAV20 in more than 1 cancer types. Because this analysis shows association rather than direction, both TRAV20-to-partner and partner-to-TRAV20 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAV20→partner) and Y-score (partner→TRAV20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	RNU2-58P →	+0.226	+2.921	<.001	.001	3	2
UCEC	RN7SL840P →	+0.454	+3.454	.001	.006	3	1
UCEC	MIR6864 →	+1.148	+4.061	<.001	.002	3	1
UCEC	VN1R18P →	+0.085	+4.133	.007	.002	3	1
SKCM	RNVU1-2A →	+0.192	+2.900	.004	.001	3	1
SKCM	SMG6-IT1 →	+0.079	+2.862	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 63 associations by consensus.

Exploration

TRAV20 survival (RNA) · tumor vs normal (RNA) · all TRAV20 data types