TRAT1

Across TCGA patient cohorts, TRAT1 protein abundance is significantly associated with the RNA expression of many other genes, with 7,993 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TRAT1-associated genes across cancer lineages are TMC3-AS1, AHSA1, and PPP1R16B. Each is linked with TRAT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both TRAT1-to-partner and partner-to-TRAT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRAT1 versus TMC3-AS1 in LSCC, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAT1→partner) and Y-score (partner→TRAT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	TMC3-AS1 →	+0.696	+0.681	<.001	<.001	3	3
LSCC	AHSA1 →	-0.642	-0.636	<.001	<.001	3	3
LSCC	PPP1R16B →	+1.294	+0.642	<.001	<.001	3	3
LSCC	AAGAB →	-0.449	-0.526	<.001	<.001	3	3
LSCC	ICMT →	-0.429	-0.591	<.001	<.001	3	3
LUAD	STAT5A →	+0.650	+0.540	.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,993 associations by consensus.

TRAT1 vs TMC3-AS1 — LSCC

Explore this scatter interactively →