TRAPPC6A

Across TCGA patient cohorts, TRAPPC6A protein abundance is significantly associated with the RNA expression of many other genes, with 11,579 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TRAPPC6A-associated genes across cancer lineages are SYDE1, SPARC, and CNN3. Each is linked with TRAPPC6A in more than 2 cancer types. Because this analysis shows association rather than direction, both TRAPPC6A-to-partner and partner-to-TRAPPC6A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TRAPPC6A versus SYDE1 in OV, with a Pearson correlation of -0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TRAPPC6A→partner) and Y-score (partner→TRAPPC6A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	SYDE1 →	-1.082	-0.621	.001	.003	3	3
OV	SPARC →	-1.301	-0.630	.001	.001	3	3
OV	CNN3 →	-0.619	-0.458	.001	.002	3	3
OV	CNRIP1 →	-1.018	-0.783	<.001	<.001	3	3
OV	PLA2G5 →	-0.579	-0.518	<.001	<.001	3	3
LSCC	SLC10A6 →	-0.725	-0.286	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,579 associations by consensus.

TRAPPC6A vs SYDE1 — OV

Explore this scatter interactively →