TPRN

mutation — cross-omics
Cross-omicsMUTATION → DRUGCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TPRN mutation is significantly associated with the drug of many other genes, with 28 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible TPRN-associated genes across cancer lineages are Crizotinib, Erlotinib, and PRT062607. Each is linked with TPRN in more than 1 cancer types. Because this analysis shows association rather than direction, both TPRN-to-partner and partner-to-TPRN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Crizotinib grouped by TPRN-low versus TPRN-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TPRN→partner) and Y-score (partner→TPRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECrizotinib →+0.419+2.646.042.04731
LARGE_INTESTINEErlotinib →+0.521+2.777.043.03831
LARGE_INTESTINEPRT062607 →+0.670+2.769.007.04031
LARGE_INTESTINE150412 →+0.343+2.777.042.03831
LARGE_INTESTINE630600 →+0.736+2.649.017.04631
LARGE_INTESTINEMasitinib →+0.439+2.652.042.04531
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

Crizotinib by TPRN expression — LARGE_INTESTINE

Box plot of Crizotinib in TPRN-low vs TPRN-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration