TOP1MT

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TOP1MT mutation is significantly associated with the RNA expression of many other genes, with 2,189 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TOP1MT-associated genes across cancer lineages are EIF4A1P2, MIR877, and MIR4305. Each is linked with TOP1MT in more than 2 cancer types. Because this analysis shows association rather than direction, both TOP1MT-to-partner and partner-to-TOP1MT results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TOP1MT→partner) and Y-score (partner→TOP1MT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEIF4A1P2 →+0.277+1.648.002.00133
HNSCMIR877 →+0.501+5.241<.001.00732
BLCAMIR4305 →+0.448+5.762<.001<.00132
COADCD24P1 →+0.187+3.620<.001.00432
UCECTUBGCP5 →+0.371+1.890<.001<.00132
UCECUHRF1 →+0.638+1.868<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,189 associations by consensus.

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