TNRC6B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNRC6B mutation is significantly associated with the total protein of many other genes, with 49 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TNRC6B-associated genes across cancer lineages are Caspase-7-cleavedD198, GAPDH, and ATM. Each is linked with TNRC6B in more than 4 cancer types. Because this analysis shows association rather than direction, both TNRC6B-to-partner and partner-to-TNRC6B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by TNRC6B-low versus TNRC6B-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNRC6B→partner) and Y-score (partner→TNRC6B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCaspase-7-cleavedD198 →+0.892+2.330<.001<.00135
SKCMGAPDH →+0.540+3.321.033.00933
UCECATM →-0.494-1.459<.001<.00133
UCECJNK_pT183_Y185 →-0.131-0.986.001.00733
UCECMEK1 →+0.346+1.716<.001<.00133
BLCAPAI-1 →+0.688+2.824.032.03432
Each partner links to its Q-omics profile. Showing the 6 strongest of 49 associations by consensus.

Caspase-7-cleavedD198 by TNRC6B expression — COAD

Box plot of Caspase-7-cleavedD198 in TNRC6B-low vs TNRC6B-high samples in COAD.

Explore this box plot interactively →

Exploration