TNRC18

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNRC18 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,878 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TNRC18-associated proteins across cancer lineages are WDR5, GTF2I, and HNRNPLL. Each is linked with TNRC18 in more than 4 cancer types. Because this analysis shows association rather than direction, both TNRC18-to-partner and partner-to-TNRC18 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TNRC18 versus WDR5 in GBM, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TNRC18→partner) and Y-score (partner→TNRC18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMWDR5 →+0.247+0.599.004<.00135
UCECGTF2I →+0.313+0.542<.001<.00135
HNSCHNRNPLL →+0.199+0.533.003<.00135
GBMDHX9 →+0.191+0.448<.001<.00135
LUADZNF316_S112 →+0.381+0.808<.001<.00135
HNSCRBBP5 →+0.249+0.719<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,878 associations by consensus.

TNRC18 vs WDR5 — GBM

Per-sample scatter of TNRC18 vs WDR5 in GBM (Pearson r = 0.40).

Explore this scatter interactively →

Exploration