TNR

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, TNR mass-spec protein is linked to patient survival in 3 of 34 cancer types, making it a survival-associated TNR data layer compared with 23 for mass-spec protein and 9 for mutation status.

The strongest signal is observed in lung adenocarcinoma (LUAD), where higher TNR mass-spec protein is associated with worse overall survival. In most high-consensus cancer types, elevated TNR expression acts as an unfavorable survival marker, although some lineages such as PDAC and LSCC show a favorable association.

LUAD, PDAC, and LSCC are the cancer types where TNR mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUADOSTertileAll0.8530.998.0196view →
PDACDFSMedianAll0.9840.327.0386view →
LSCCDFSMedianIII,IV0.9250.639.0302view →
Pink = unfavorable, green = favorable. Showing the 3 strongest of 3 lineages.

TNR–LUAD (OS)

Kaplan–Meier survival curve for TNR mass-spec protein-high vs -low samples in LUAD.

Open the LUAD breakdown →

Exploration