TNNI3K

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNNI3K protein abundance is significantly associated with the RNA expression of many other genes, with 15,493 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TNNI3K-associated genes across cancer lineages are DDX55, KIF14, and HELLS. Each is linked with TNNI3K in more than 6 cancer types. Because this analysis shows association rather than direction, both TNNI3K-to-partner and partner-to-TNNI3K results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TNNI3K versus DDX55 in HNSC, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNNI3K→partner) and Y-score (partner→TNNI3K) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDDX55 →+0.577+0.345.001.00336
GBMKIF14 →+0.991+0.609<.001<.00136
GBMHELLS →+0.841+0.606<.001<.00136
HNSCTOP2A →+1.126+0.391.001<.00136
HNSCKIF11 →+0.872+0.368.003.00236
COADSKA1 →+0.893+0.673.001.00436
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,493 associations by consensus.

TNNI3K vs DDX55 — HNSC

Per-sample scatter of TNNI3K vs DDX55 in HNSC (Pearson r = 0.33).

Explore this scatter interactively →

Exploration