TNFRSF21

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TNFRSF21 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TNFRSF21-associated genes across cancer lineages are PPDPFL, HSFY1, and ARGFX. Each is linked with TNFRSF21 in more than 1 cancer types. Because this analysis shows association rather than direction, both TNFRSF21-to-partner and partner-to-TNFRSF21 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PPDPFL grouped by TNFRSF21-low versus TNFRSF21-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF21→partner) and Y-score (partner→TNFRSF21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPPDPFL →+0.069+5.217<.001<.00131
LARGE_INTESTINEHSFY1 →+0.019+4.415<.001.00731
LARGE_INTESTINEARGFX →+0.015+5.022<.001.00231
LARGE_INTESTINEBHLHA9 →+0.150+4.095.007.00931
LARGE_INTESTINECENPVL1 →+0.286+4.095<.001.00931
LARGE_INTESTINEAMELY →+0.045+5.022<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

PPDPFL by TNFRSF21 expression — LARGE_INTESTINE

Box plot of PPDPFL in TNFRSF21-low vs TNFRSF21-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration