TNFRSF18

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TNFRSF18 mutation is significantly associated with the RNA expression of many other genes, with 128 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible TNFRSF18-associated genes across cancer lineages are RN7SL794P, NXPE2P1, and SNORD116-10. Each is linked with TNFRSF18 in more than 1 cancer types. Because this analysis shows association rather than direction, both TNFRSF18-to-partner and partner-to-TNFRSF18 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TNFRSF18→partner) and Y-score (partner→TNFRSF18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRN7SL794P →+0.172+3.631<.001.00232
COADNXPE2P1 →+0.574+4.181<.001.00932
UCECSNORD116-10 →+0.518+5.335<.001.00332
UCECRNA5SP205 →+0.294+4.852.009.00632
SKCMOR51C1P →+0.035+4.913<.001<.00132
SKCMRN7SKP273 →+0.158+2.992<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 128 associations by consensus.

Exploration