TMF1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,382 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TMF1-associated proteins across cancer lineages are SLC25A5, MRPL47, and MACO1. Each is linked with TMF1 in more than 4 cancer types. Because this analysis shows association rather than direction, both TMF1-to-partner and partner-to-TMF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMF1 versus SLC25A5 in BRCA, with a Pearson correlation of -0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TMF1→partner) and Y-score (partner→TMF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASLC25A5 →-0.393-0.404<.001<.00135
LSCCMRPL47 →-0.351-0.375.001<.00135
UCECMACO1 →-0.301-0.343<.001.00434
PDACTMEM263 →+0.394+0.296<.001<.00134
UCECDNAJC11 →-0.413-0.430<.001<.00134
COADDDX28 →-0.314-0.416.008<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,382 associations by consensus.

TMF1 vs SLC25A5 — BRCA

Per-sample scatter of TMF1 vs SLC25A5 in BRCA (Pearson r = -0.41).

Explore this scatter interactively →

Exploration