TMF1

Across TCGA cell cohorts, TMF1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,518 significant associations in total. BONE shows the largest number of these associations.

The most reproducible TMF1-associated GO terms across cancer lineages are Golgi vesicle transport, COPII-coated vesicle cargo loading, and Vesicle-mediated transport to the plasma membrane. Each is linked with TMF1 in more than 16 cancer types. Because this analysis shows association rather than direction, both TMF1-to-partner and partner-to-TMF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by TMF1-low versus TMF1-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TMF1→partner) and Y-score (partner→TMF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Golgi vesicle transport →	+0.069	+0.891	.001	.001	3	17
KIDNEY	COPII-coated vesicle cargo loading →	+0.115	+0.817	.001	.006	3	16
BONE	Vesicle-mediated transport to the plasma membrane →	+0.083	+1.036	<.001	<.001	3	16
UPPER_AERODIGESTIVE_TRACT	Protein localization to vacuole →	+0.076	+0.828	<.001	<.001	3	16
LUNG_NSCLC_LUSC	Macroautophagy →	+0.057	+0.768	.002	.001	2	16
BONE	Cytosolic transport →	+0.088	+1.010	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,518 associations by consensus.

Golgi vesicle transport by TMF1 expression — BONE

Explore this box plot interactively →