TMEM9B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM9B protein abundance is significantly associated with the RNA expression of many other genes, with 7,114 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible TMEM9B-associated genes across cancer lineages are SUPT3H, NFATC4, and ISYNA1. Each is linked with TMEM9B in more than 3 cancer types. Because this analysis shows association rather than direction, both TMEM9B-to-partner and partner-to-TMEM9B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMEM9B versus SUPT3H in HNSC, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM9B→partner) and Y-score (partner→TMEM9B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSUPT3H →-0.700-0.328.001<.00134
CCRCCNFATC4 →-0.737-0.224<.001.00233
OVISYNA1 →-1.012-0.588.002.00533
OVATP6V0E1 →+0.789+0.644<.001<.00133
OVRIOK1 →-0.449-0.570.006.00433
OVNASP →-0.745-0.629.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,114 associations by consensus.

TMEM9B vs SUPT3H — HNSC

Per-sample scatter of TMEM9B vs SUPT3H in HNSC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration