TMEM79

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TMEM79 mutation is significantly associated with the RNA expression of many other genes, with 22 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible TMEM79-associated genes across cancer lineages are SPRR2G, C16orf92, and MUC7. Each is linked with TMEM79 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM79-to-partner and partner-to-TMEM79 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SPRR2G grouped by TMEM79-low versus TMEM79-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM79→partner) and Y-score (partner→TMEM79) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaSPRR2G →+0.069+3.906<.001.00931
BLOOD_MyelomaC16orf92 →+0.292+3.906.002.00931
BLOOD_MyelomaMUC7 →+0.023+3.906<.001.00931
BLOOD_MyelomaTCP11X1 →+0.041+3.906<.001.00931
LARGE_INTESTINEZP2 →+0.129+2.921<.001.00531
LARGE_INTESTINEKLHDC7B →+0.636+3.707<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

SPRR2G by TMEM79 expression — BLOOD_Myeloma

Box plot of SPRR2G in TMEM79-low vs TMEM79-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration