TMEM63B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM63B mutation is significantly associated with the RNA expression of many other genes, with 3,144 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM63B-associated genes across cancer lineages are RASSF1, RPS27L, and PIGN. Each is linked with TMEM63B in more than 3 cancer types. Because this analysis shows association rather than direction, both TMEM63B-to-partner and partner-to-TMEM63B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RASSF1 grouped by TMEM63B-low versus TMEM63B-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM63B→partner) and Y-score (partner→TMEM63B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRASSF1 →+0.600+2.732<.001.00334
UCECRPS27L →+0.608+3.928<.001<.00133
COADPIGN →+0.529+3.389<.001.00433
UCECATP6V1D →+0.423+3.087<.001<.00133
UCECKIAA0586 →+0.328+3.064.001<.00133
COADCEP76 →+0.434+2.933.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,144 associations by consensus.

RASSF1 by TMEM63B expression — SKCM

Box plot of RASSF1 in TMEM63B-low vs TMEM63B-high samples in SKCM.

Explore this box plot interactively →

Exploration