TMEM63B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TMEM63B mutation is significantly associated with the RNA expression of many other genes, with 402 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible TMEM63B-associated genes across cancer lineages are STMND1, IFNA21, and OR2V1. Each is linked with TMEM63B in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM63B-to-partner and partner-to-TMEM63B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, STMND1 grouped by TMEM63B-low versus TMEM63B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM63B→partner) and Y-score (partner→TMEM63B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINESTMND1 →+0.316+3.451.003.00232
BLOOD_MyelomaIFNA21 →+0.079+3.716<.001.00531
BLOOD_MyelomaOR2V1 →+0.027+3.285<.001.00931
LUNG_NSCLC_LUSCMAGEB5 →+0.033+4.643<.001.00831
PANCREASPRSS58 →+0.067+4.584<.001<.00131
LARGE_INTESTINECBY1 →+0.781+3.330<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 402 associations by consensus.

STMND1 by TMEM63B expression — LARGE_INTESTINE

Box plot of STMND1 in TMEM63B-low vs TMEM63B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration