TMEM31

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM31 mutation is significantly associated with the RNA expression of many other genes, with 1,278 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM31-associated genes across cancer lineages are RNU6-666P, MTATP6P30, and RPS3AP17. Each is linked with TMEM31 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM31-to-partner and partner-to-TMEM31 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-666P grouped by TMEM31-low versus TMEM31-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM31→partner) and Y-score (partner→TMEM31) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNU6-666P →+0.438+7.954<.001.00832
COADMTATP6P30 →+0.147+7.741<.001.00932
UCECRPS3AP17 →+0.063+2.455.006.00132
LUSCUSP9YP10 →+0.089+7.924<.001.00832
HNSCOR10R2 →+0.059+7.954<.001.00831
HNSCRNU6-386P →+0.438+7.954<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,278 associations by consensus.

RNU6-666P by TMEM31 expression — HNSC

Box plot of RNU6-666P in TMEM31-low vs TMEM31-high samples in HNSC.

Explore this box plot interactively →

Exploration