TMEM30BP1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM30BP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,657 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TMEM30BP1-associated proteins across cancer lineages are NELFE, CEBPZ, and PLS3. Each is linked with TMEM30BP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both TMEM30BP1-to-partner and partner-to-TMEM30BP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMEM30BP1 versus NELFE in GBM, with a Pearson correlation of -0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM30BP1→partner) and Y-score (partner→TMEM30BP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNELFE →-0.395-0.733<.001<.00134
BRCACEBPZ →-0.332-0.470<.001.00234
GBMPLS3 →+0.595+0.655<.001<.00134
OVHNRNPL →-0.225-0.878.005<.00134
GBMMDC1 →-0.421-0.892<.001<.00134
BRCAMPLKIP_T10 →-0.403-0.425<.001.00734
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,657 associations by consensus.

TMEM30BP1 vs NELFE — GBM

Per-sample scatter of TMEM30BP1 vs NELFE in GBM (Pearson r = -0.43).

Explore this scatter interactively →

Exploration