TMEM245

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM245 mutation is significantly associated with the RNA expression of many other genes, with 1,624 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM245-associated genes across cancer lineages are SNORA59B, MTRNR2L2, and RN7SL478P. Each is linked with TMEM245 in more than 2 cancer types. Because this analysis shows association rather than direction, both TMEM245-to-partner and partner-to-TMEM245 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORA59B grouped by TMEM245-low versus TMEM245-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM245→partner) and Y-score (partner→TMEM245) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNORA59B →+0.156+1.955.005.00233
UCECMTRNR2L2 →+0.433+1.670.002.00532
BLCARN7SL478P →+0.255+3.098<.001.00732
COADRNU6-267P →+0.933+5.435<.001.00532
KIRPMTND4LP19 →+0.232+5.159<.001.00732
BLCAART2BP →+0.109+4.985<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,624 associations by consensus.

SNORA59B by TMEM245 expression — UCEC

Box plot of SNORA59B in TMEM245-low vs TMEM245-high samples in UCEC.

Explore this box plot interactively →

Exploration