TMEM229A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM229A mutation is significantly associated with the total protein of many other genes, with 14 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM229A-associated genes across cancer lineages are Ku80, MEK1, and mTOR_pS2448. Each is linked with TMEM229A in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM229A-to-partner and partner-to-TMEM229A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by TMEM229A-low versus TMEM229A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM229A→partner) and Y-score (partner→TMEM229A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.272+2.183.027.03531
UCECMEK1 →+0.523+3.169.006.01931
UCECmTOR_pS2448 →-0.225-2.980.003.03622
UCECNotch1 →+0.199+3.009.007.01931
UCECTuberin →+0.389+3.009.005.01931
UCECATM →-0.807-3.321<.001.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

Ku80 by TMEM229A expression — UCEC

Box plot of Ku80 in TMEM229A-low vs TMEM229A-high samples in UCEC.

Explore this box plot interactively →

Exploration