TIMM9

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TIMM9 mutation is significantly associated with the RNA expression of many other genes, with 1,411 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TIMM9-associated genes across cancer lineages are MIR4701, MIR5188, and MIR4445. Each is linked with TIMM9 in more than 1 cancer types. Because this analysis shows association rather than direction, both TIMM9-to-partner and partner-to-TIMM9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4701 grouped by TIMM9-low versus TIMM9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TIMM9→partner) and Y-score (partner→TIMM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR4701 →+0.781+2.293.004.00631
UCECMIR5188 →+0.800+2.328<.001.00431
UCECMIR4445 →+0.248+5.019<.001.00131
UCECATP6V1E1P2 →+0.142+2.398.007.00731
UCECASB16-AS1 →+0.690+3.606<.001.00131
UCECZSCAN5DP →+0.516+3.627<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,411 associations by consensus.

MIR4701 by TIMM9 expression — UCEC

Box plot of MIR4701 in TIMM9-low vs TIMM9-high samples in UCEC.

Explore this box plot interactively →

Exploration