THUMPD3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, THUMPD3 mutation is significantly associated with the RNA expression of many other genes, with 1,241 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible THUMPD3-associated genes across cancer lineages are RRM2P4, RPS10P21, and RNU7-105P. Each is linked with THUMPD3 in more than 1 cancer types. Because this analysis shows association rather than direction, both THUMPD3-to-partner and partner-to-THUMPD3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RRM2P4 grouped by THUMPD3-low versus THUMPD3-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (THUMPD3→partner) and Y-score (partner→THUMPD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRRM2P4 →+0.074+5.539<.001.00432
BRCARPS10P21 →+0.145+5.441<.001.00532
HNSCRNU7-105P →+0.568+7.954<.001.00832
READMIR6885 →+0.479+5.257<.001.00232
BLCARNA5SP333 →+0.182+4.618<.001.00532
COADMTCO3P16 →+0.203+5.893<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,241 associations by consensus.

RRM2P4 by THUMPD3 expression — CESC

Box plot of RRM2P4 in THUMPD3-low vs THUMPD3-high samples in CESC.

Explore this box plot interactively →

Exploration