TGIF2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TGIF2 mutation is significantly associated with the RNA expression of many other genes, with 1,205 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TGIF2-associated genes across cancer lineages are MTCYBP45, TUBB8P5, and PCYT1B-AS1. Each is linked with TGIF2 in more than 1 cancer types. Because this analysis shows association rather than direction, both TGIF2-to-partner and partner-to-TGIF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTCYBP45 grouped by TGIF2-low versus TGIF2-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TGIF2→partner) and Y-score (partner→TGIF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCMTCYBP45 →+0.131+4.934<.001.00232
SKCMTUBB8P5 →+0.029+3.623.003.00632
CESCPCYT1B-AS1 →+0.156+4.969<.001.00432
UCECRNU6-376P →+0.266+2.868<.001.00932
UCECSUCLA2P3 →+0.132+1.935.005.00432
UCECMTCO1P35 →+0.191+2.534.003.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,205 associations by consensus.

MTCYBP45 by TGIF2 expression — CESC

Box plot of MTCYBP45 in TGIF2-low vs TGIF2-high samples in CESC.

Explore this box plot interactively →

Exploration