TGFB3-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TGFB3-AS1 RNA differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of TGFB3-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where TGFB3-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types TGFB3-AS1 is over-expressed in tumor, although a few such as THCA and UCEC show the opposite, repressed pattern.

THCA, CHOL, and UCEC are the cancer types where TGFB3-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TGFB3-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllAll−0.074.0054view →
CHOLAllAll+0.224.0052view →
UCECAllAll−0.182.0382view →
LIHCAllAll−0.031.0072view →
LUSCFemaleAll−0.172.0311view →
KICHAllIII,IV−0.167.0411view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

TGFB3-AS1–THCA

Tumor-vs-normal expression box plot for TGFB3-AS1 RNA in THCA.

Open the THCA breakdown →

Exploration