TEX55

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TEX55 mutation is significantly associated with the RNA expression of many other genes, with 2,510 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TEX55-associated genes across cancer lineages are MIR4706, RPS29P32, and RNA5SP412. Each is linked with TEX55 in more than 2 cancer types. Because this analysis shows association rather than direction, both TEX55-to-partner and partner-to-TEX55 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4706 grouped by TEX55-low versus TEX55-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TEX55→partner) and Y-score (partner→TEX55) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMIR4706 →+0.893+4.295<.001.00833
UCECRPS29P32 →+0.439+2.277<.001.00332
UCECRNA5SP412 →+0.438+1.967.003.00532
SKCMHMGXB4 →+0.503+2.163.004.00932
SKCMFAM118A →+0.479+2.893.001<.00132
SKCMCGRRF1 →+0.491+3.820.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,510 associations by consensus.

MIR4706 by TEX55 expression — COAD

Box plot of MIR4706 in TEX55-low vs TEX55-high samples in COAD.

Explore this box plot interactively →

Exploration